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Campylobacterota

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Campylobacterota
Campylobacter
Scientific classification Edit this classification
Domain: Bacteria
Phylum: Campylobacterota
Waite et al. 2021[1]
Classes
Synonyms
  • "Campylobacterota" Waite et al. 2018
  • Epsilobacteria Cavalier-Smith 2002
  • "Epsilonbacteraeota" (sic) Waite et al. 2017[2]
  • "Epsilonbacterota"

Campylobacterota are a phylum of Gram-negative bacteria.[3] Until the 2021 revision of bacterial taxonomy by the ICSP,[4] the entire phylum was classified within the Proteobacteria (synonym Pseudomonadota) as the Epsilonproteobacteria and the Desulfurellales.[5] The separation of this phylum from "Proteobacteria" was originally proposed in 2017, using GTDB-based methods.[2]

Phylogeny

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The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[6] and National Center for Biotechnology Information (NCBI)[7]

16S rRNA based LTP_10_2024[8][9][10] 120 marker proteins based GTDB 09-RS220[11][12][13]
Desulfurellia
Campylobacteria
Nautiliales
Campylobacterales

Nitratiruptoraceae

Hydrogenimonadaceae

Thioreductoraceae

Helicobacteraceae

Sulfurovaceae

Sulfurimonadaceae

Sulfurospirillaceae

Arcobacteraceae

Campylobacteraceae

Desulfurellia
Desulfurellales

Desulfurellaceae Kuever, Rainey & Widdel 2006

Hippeaceae Waite et al. 2020

Campylobacteria
Nautiliales

Nautiliaceae Miroshnichenko et al. 2004

Campylobacterales

Helicobacteraceae Garrity et al. 2006

Arcobacteraceae Waite et al. 2020

Sulfurospirillaceae Waite et al. 2020

Campylobacteraceae Vandamme & De Ley 1991

Thiovulaceae Waite et al. 2020

Sulfurimonadaceae Waite et al. 2020

Nitratiruptoraceae Waite et al. 2020

Hydrogenimonadaceae Waite et al. 2020

Sulfurovaceae Waite et al. 2020

See also

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References

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  1. ^ Oren A, Garrity GM (2021). "Valid publication of the names of forty-two phyla of prokaryotes". Int J Syst Evol Microbiol. 71 (10): 5056. doi:10.1099/ijsem.0.005056. PMID 34694987. S2CID 239887308.
  2. ^ a b Waite, David W.; Vanwonterghem, Inka; Rinke, Christian; Parks, Donovan H.; Zhang, Ying; Takai, Ken; Sievert, Stefan M.; Simon, Jörg; Campbell, Barbara J.; Hanson, Thomas E.; Woyke, Tanja; Klotz, Martin G.; Hugenholtz, Philip (2017). "Comparative Genomic Analysis of the Class Epsilonproteobacteria and Proposed Reclassification to Epsilonbacteraeota (phyl. nov.)". Frontiers in Microbiology. 8: 682. doi:10.3389/fmicb.2017.00682. ISSN 1664-302X. PMC 5401914. PMID 28484436.
  3. ^ "www.ncbi.nlm.nih.gov". Retrieved 2009-03-19.
  4. ^ Robitzski, Dan. "Newly Renamed Prokaryote Phyla Cause Uproar". The Scientist. LabX Media Group. Retrieved 17 February 2024.
  5. ^ Berman, Jules (2019). Taxonomic Guide to Infectious Diseases (2 ed.). Elsevier. pp. 39–119. Retrieved 17 February 2024.
  6. ^ A.C. Parte; et al. "Campylobacterota". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 2023-09-09.
  7. ^ Sayers; et al. "Campylobacterota". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2023-09-09.
  8. ^ "The LTP". Retrieved 10 December 2024.
  9. ^ "LTP_all tree in newick format". Retrieved 10 December 2024.
  10. ^ "LTP_10_2024 Release Notes" (PDF). Retrieved 10 December 2024.
  11. ^ "GTDB release 09-RS220". Genome Taxonomy Database. Retrieved 10 May 2024.
  12. ^ "bac120_r220.sp_labels". Genome Taxonomy Database. Retrieved 10 May 2024.
  13. ^ "Taxon History". Genome Taxonomy Database. Retrieved 10 May 2024.
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